2024
2023
2022
2021
2020
2019
2018
2017

2024

  • Sara Chandy, Hithesh Kumar, Sara Pearl, Soumya Basu, Gurumoorthy M, Janani Sankar, Anand Manoharan, Sudha Ramaiah, Anand Anbarasu. Whole genome analysis reveals unique traits of SARS-CoV-2 in pediatric patients. Gene. 2024 Apr 24:148508. https://doi.org/10.1016/j.gene.2024.148508
  • Santhiya Vijayakumar, Hithesh Kumar, Soumya Basu, Sara Chandy, Anand Anbarasu, Anand Manoharan, Sudha Ramaiah. Changing Landscape of Antimicrobial Resistance in Neonatal Sepsis: An in silico Analyses of Multidrug Resistance in Klebsiella pneumoniae. The Pediatric Infectious Disease Journal, 2024. https://doi.org/10.1097/INF.0000000000004358 
  • Gayathri Ashok, Soumya Basu, Priyamvada P, Anand Anbarasu, Sreenivasulu Chintala and Sudha Ramaiah. Coinfections in human papillomavirus associated cancers and prophylatic recommendations. Reviews in Medical Virology, 2024 e2524. https://doi.org/10.1002/rmv.2524
  • Hithesh Kumar, Anand Manoharan, Anand Anbarasu and Sudha Ramaiah. Computational study of the piperidine and FtsZ interaction in Salmonella Typhi: implications for disrupting cell division machinery. Journal Biomolecular Structure Dynamics, 2024 1–14. https://doi.org/10.1080/07391102.2024.2314272
  • RC Theijeswini, Soumya Basu, Rayapadi G Swetha, Jayaraman Tharmalingam, Sudha Ramaiah, R Calaivanane, V. Raja Sreedharan, Paul Livingstone and Anand Anbarasu. Prophylatic and Therapeutic measures for emerging and re-emerging viruses: artificial intelligence and machine learning – the key to a promising future. Health and Technology, 2024  https://doi.org/10.1007/s12553-024-00816-z
  • Saranya Vijayakumar, Rayapadi G Swetha, Yamuna Devi Batthavatchalam, Karthick Vasudevan, Baby Abirami Shankar, Agilandeeswari Kirubananthan, Kamini Walia, Sudha Ramaiah, Indranil Biswas, Balaji Veeraraghavan and Anand Anbarasu. Genomic investigation unevils colistin resistance mechanism in carbapenem-resistant Acinetobacter baumannii clinical isolates. Microbiology Spectrum, 2024 e02511-23. https://doi.org/10.1128/spectrum.02511-23
  • Soumya Basu, Balaji Veeraraghavan and Anand Anbarasu. Impact of PmrB mutations on clinical Klebsiella pneumoniae with variable colistin-susceptibilities: Structural insights and potent therapeutic solutions. Chemical Biology and Drug Design, 2024 103: e14381.  https://doi.org/10.1111/cbdd.14381
  • Sagnik Nag, Oishi Mitra, Sankarganesh P, Arghyadeep Bhattacharjee, Sourav Mohanto, B.H. Jaswanth Gowda, Shinjini Kar, Sudha Ramaiah, Anand Anbarasu and Mohammed Gulzar Ahmed. Exploring the emerging trends in the synthesis ad theranostix paradigms of cerium oxide nanoparticles (CeONPs): A comprehensive review. Materials Today Chemistry, 2024 35: 101894. https://doi.org/10.1016/j.mtchem.2023.101894

2023

  • Reetika Debroy and Sudha Ramaiah. Consolidated knowledge-guided computational pipeline for therapeutic intervention against bacterial biofilms – a review. Biofouling, 2023 Dec 18: 1-20. https://doi.org/10.1080/08927014.2023.2294763
  • Gayathri Ashok, Abirami Soundararajan, Anand Anbarasu and Sudha Ramaiah. Elucidating the molecular role of MUC5B in progressive lung adenocarcinoma: Prospects for early diagnosis. Journal of Molecular Recognition, 2023 Oct 7:e3064. https://doi.org/10.1002/jmr.306
  • Hithesh Kumar, Anand Manoharan and Sudha Ramaiah. Unravelling the nsSNP mediated mechanism of antibiotic resistance in Salmonella enterica serovar typhi and identification of potential therapeutic alternatives: A genomics and structural bioinformatics study. Clinical Epidemiology and Global Health, 2023 Oct 14:101407. https://doi.org/10.1016/j.cegh.2023.101407
  • Sreeram Chandra Murthy Peela, Soumya Basu, Jyoti Sharma, Abdullah F AlAsmari, Fawaz AlAsmari, Sultan Alalmaee, Sudha Ramaiah, Sujatha Sistla, Paul Livingstone and Anand Anbarasu. Structure Elucidation and Interaction Dynamics of MefA-MsrD Efflux Proteins in Streptococcus pneumoniae: Impact on Macrolide Susceptibility, ACS Omega, 2023.  https://doi.org/10.1021/acsomega.3c05210
  • P. Priyamvada and Sudha Ramaiah. “Potential Signature Therapeutic Biomarkers TOP2A, MAD2L1, and CDK1 in Colorectal Cancer: A Systems Biomedicine‑Based Approach”. Biochemical Genetics, 2023. https://doi.org/10.1007/s10528-023-10544-0
  • P. Priyamvada and Sudha Ramaiah. Pan-genome and reverse vaccinology approaches to design multi-epitope vaccine against Epstein-Barr virus associated with colorectal cancer. Immunologic Research, 2023. https://doi.org/10.1007/s12026-023-09403-2
  • Gayathri Ashok and Sudha Ramaiah. FN1 and cancer-associated fibroblasts markers influence immune microenvironment in clear cell renal cell carcinoma. The Journal of Gene Medicine, 2023, e3556. https://doi: 10.1002/jgm.3556.
  • Sreenivasulu Chintala, Maura A. Dankoski, Anand Anbarasu, Sudha Ramaiah, Sravan Kumar Miryala and Rachel A. Katzanellenbogen. NFX1-123: A potential therapeutic target in cervical cancer. Journal of Medical Virology, 2023,  95, Pages e28856. https://doi.org/10.1002/jmv.28856.
  • Gayathri Ashok, Rohini Das, Anand Anbarasu and Sudha Ramaiah. Comprehensive analysis on the diagnostic role of circulatory exosome-based miR-92a-3p for osteoblastic metastases in prostate adenocarcinoma. Journal of Molecular Recognition, 2023, Pages e3042. https://doi.org/10.1002/jmr.3042.
  • Suvitha Anbarasu and Anand Anbarasu. Cancer-biomarkers associated with sex hormone receptors and recent therapeutic advancements: a comprehensive review. Medical Oncology, 2023, 4, Pages 171. https://doi.org/10.1007/s12032-023-02044-3.
  • Reetika Debroy and Sudha Ramaiah. Translational protein RpsE as an alternative target for novel nucleoside analogues to treat MDR Enterobacter cloacae ATCC 13047: network analysis and molecular dynamics study. World Journal of Microbiology and Biotechnology, 2023, 39, Pages 187. https://doi.org/10.1007/s11274-023-03634-z.
  • Soumya Basu, Gayathri Ashok, Reetika Debroy, Sudha Ramaiah, Paul Livingstone and Anand Anbarasu. Impact of the COVID-19 pandemic on routine vaccine landscape: A global perspective. Human vaccines & Immunotherapeutics, 2023, Pages 2199656. https://doi.org/10.1080/21645515.2023.2199656.
  • Aniket Naha and Sudha Ramaiah. Novel antimicrobial peptide SAAP mutant as a better adjuvant of sulbactam-based treatments against strains of XDR Acinetobacter baumannii. Probiotics and Antimicrobial Proteins, 2023, Pages 1-15. https://doi.org/10.1007/s12602-023-10067-5.
  • Usharani Nagarajan, Aniket Naha, Anand Anbarasu, Sudha Ramaiah, Swarna V. Kanth and Saravanan Natarajan. Green sysnthesis and characterization of water soluble nanocarnosine: A prospective drug delivery system. Applied Materials Today, 2023, 32, Pages 101812. https://doi.org/10.1016/j.apmt.2023.101812.
  • Shabduli Shinde, Sravan Kumar Miryala, Anand Anbarasu and Sudha Ramaiah. Systems biology approach to understand the interplay between Bacillus anthracis and human host genes that leads to CVDs. Microbial Pathogenesis, 2023, 176, Pages 106019. https://doi.org/10.1016/j.micpath.2023.106019. 

2022

  • Preethi A R and Anand Anbarasu. Antimicrobial peptides as Immunomodulators and Antimicrobial Agents to Combat Mycobacterium tuberculosis: A Critical Review. Probiotics and Antimicrobial Proteins, 2022. https://doi.org/10.1007/s12602-022-10018-6
  • Yamuna Devi Bakthavatchalam, Soumya Basu, Abirami Shankar, Sudha Ramaiah, Anand Anbarasu and Balaji Veeraraghavan. Genomics and structural insight into the masking of gentamicin-resistance in clinical Burkholderia pseudomallei strain VB29710 from India. Diagnostic Microbiology and Infectious Disease, 2022, Pages 115878. https://doi.org/10.1016/j.diagmicrobio.2022.115878
  • Rayapadi G Swetha, Soumya Basu, Sudha Ramaiah and Anand Anbarasu. Multi-epitope vaccine for Monkeypox using Pan-Genome and Reverse vaccinology approaches. Viruses, 2022, 14, Pages 2504. https://doi.org/10.3390/v14112504
  • Soumya Basu, Reetika Debroy, Hithesh Kumar, Harpreet Singh, Sudha Ramaiah and Anand Anbarasu. Bioactive phytocompounds against specific target proteins of Borrelia recurrentis responsible for louse-borne relapsing fever: Genomics and structural bioinformatics evidence. Medical and veterinary entomology, 2022. https://doi.org/10.1111/mve.12623
  • Hithesh Kumar, Anand Manoharan, Anand Anbarasu and Sudha Ramaiah. Emergence of sulphonamide resistance in azithromycin-resistant pediatric strains of Salmonella Typhi and Paratyphi A: A genomics insight. Gene, 2022, 851, Pages 146995. https://doi.org/10.1016/j.gene.2022.146995
  • Gayathri Ashok and Sudha Ramaiah. A critical review of datasets and computational suites for improving cancer theranostics and biomarker discovery. Medical Oncology, 2022. https://doi.org/10.1007/s12032-022-01815-8
  • Sudha Ramaiah, Sravan Kumar Miryala, Hithesh Kumar and Anand Anbarasu. In Silico Approaches for Understanding Antimicrobial Resistance in Bacterial Pathogens. In Therapeutic Protein Targets for Drug Discovery and Clinical Evaluation. WORLD SCIENTIFIC, 2022, Pages 123–157.  https://doi.org/10.1142/9789811254796_0006
  • Aniket Naha and Sudha Ramaiah. Structural chemistry and molecular-level interactome reveals histidine kinase EvgS to subvert both antimicrobial resistance and virulence in Shigella flexneri 2a str. 301. 3 Biotech 2022, 258. DOI:10.1007/s13205-022-03325-w
  • Soumya Basu, Rosemol Varghese, Reetika Debroy, Sudha Ramaiah, Balaji Veeraraghavan, Anand Anbarasu. Non-steroidal anti-inflammatory drugs ketorolac and etodolac can augment the treatment against pneumococcal meningitis by targeting penicillin-binding proteins. Microbial Pathogenesis, 2022, 105694. https://doi.org/10.1016/j.micpath.2022.105694
  • Gayathri Ashok, Sravan Kumar Miryala, Megha Treesa Saju, Anand Anbarasu, Sudha Ramaiah. FN1 encoding fibronectin as a pivotal signaling gene for therapeutic intervention against pancreatic cancer. Molecular Genetics and Genomics, 2022, Pages 1-16. https://doi.org/10.1007/s00438-022-01943-w
  • Reetika Debroy, Sudha Ramaiah, MurC ligase of multi-drug resistant Salmonella Typhi can be inhibited by novel Curcumin derivative: Evidence from Molecular Docking and Dynamics Simulations. The International Journal of Biochemistry & Cell Biology, 2022, 106279. https://doi.org/10.1016/j.biocel.2022.106279
  • Aniket Naha, Sanjukta Banerjee, Reetika Debroy, Soumya Basu, Gayathri Ashok, P. Priyamvada, Hithesh Kumar, Preethi A R, Harpreet Singh, Anand Anbarasu and Sudha Ramaiah, Network Metrics, Structural Dynamics and Density Functional Theory Calculations identified a Novel Ursodeoxycholic Acid Derivative against Therapeutic Target Parkin for Parkinson’s Disease. Computational and Structural Biotechnology Journal, 2022. https://doi.org/10.1016/j.csbj.2022.08.017
  • Sravan Kumar Miryala, Anand Anbarasu, Sudha Ramaiah, Organ-specific host differential gene expression analysis in systemic candidiasis: A systems biology approach, Microbial Pathogenesis, 2022, 15, Pages 105677.
  • P. Priyamvada, Reetika Debroy, Anand Anbarasu, Sudha Ramaiah, A comprehensive review on genomics, systems biology and structural biology approaches for combating antimicrobial resistance in ESKAPE pathogens: computational tools and recent advancements. World Journal of Microbiol Biotechnology, 2022, 153, https://doi.org/10.1007/s11274-022-03343-z.
  • Sravan Kumar Miryala, Soumya Basu, Aniket Naha, Reetika Debroy, Sudha Ramaiah, Anand Anbarasu, Saravanan Natarajan, Datasets comprising the quality validations of simulated protein-ligand complexes and SYBYL docking scores of bioactive natural compounds as inhibitors of Mycobacterium tuberculosis protein-targets. Data in Brief, 2022, 42, Pages 108146.
  • Soumya Basu, Sahil Mandar Joshi, Sudha Ramaiah, Anand Anbarasu, Designing Anti-Microbial Peptides Against Major β-Lactamase Enzymes in Clinically Important Gram-Negative Bacterial Pathogens: An In-Silico Study. Probiotics and Antimicrobial Proteins, 2022, 14, Pages 263-276.
  • Rosemol Varghese, Soumya Basu, Ayyanraj Neeravi, Agilakumari Pragasam, V Aravind, Richa Gupta, Angel Miraclin, Sudha Ramaiah, Anand Anbarasu, Balaji Veeraraghavan, Emergence of Meropenem Resistance Among Cefotaxime Non-susceptible Streptococcus pneumoniae: Evidence and Challenges, Frontiers in Microbiology, 2022, 3, Pages 12.
  • Anand Manoharan, Dipjyoti Dey, Sulochana Putlibai, Sudha Ramaiah, Anand Anbarasu, Balasubramanian S. Epidemiology of Multidrug Resistance among Salmonella enterica serovars typhi and paratyphi A at a Tertiary Pediatric Hospital in India Over a Decade; In-silico Approach to Elucidate the Molecular Mechanism of Quinolone Resistance. International journal of infectious diseases, 2022, 119, Pages 146-149.
  • Soumya Basu, Aniket Naha, Balaji Veeraraghavan, Sudha Ramaiah, Anand Anbarasu, In-silico structure evaluation of BAG3 and elucidating its association with bacterial infections through protein-protein and host-pathogen interaction analysis, Journal of cellular Biochemistry, 2022, 123, Pages 115-127.
  • Sravan Kumar Miryala, Sudha Ramaiah, Cellular and molecular level host-pathogen interactions in Francisella tularensis: A microbial gene network study. Computational biology & chemistry, 2022, Pages 96. [TOP]

2021

  • Sravan Kumar Miryala, Anand Anbarasu, Sudha Ramaiah, Gene interaction network approach to elucidate the multidrug resistance mechanisms in the pathogenic bacterial strain Proteus mirabilis, Journal of Cellular Physiology, 2021, 236, Pages 468–479.
  • Somorita Baishya, Chandrayee Deshamukhya, Jayalaxmi Wangkheimayum, Bhaskar Jyoti Das, Anand Anbarasu, Anupam Das Talukdar, Amitabha Bhattacharjee, Manabendra Dutta Choudhury, Transcriptional expression of secondary resistance genes ccdB and repA2 is enhanced in presence of cephalosporin and carbapenem in Escherichia coli, BMC Microbiology, 2021, 21, Pages 79.
  • Nebu George Thomas, Anand Manoharan, Anand Anbarasu, Preclinical Evaluation of Sol-gel Synthesized Modulated 45S5-Bioglass Based Biodegradable Bone Graft Intended for Alveolar Bone Regeneration, Journal of Hard Tissue Biology, 2021, 30, Pages 303-308.
  • Sravan Kumar Miryala, Anand Anbarasu, Sudha Ramaiah,  Gene interaction network to unravel the role of gut bacterial species in cardiovascular diseases: E. coli O157:H7 host-bacterial interaction study, Computers in Biology and Medicine, 2021, 133, 104417.
  • Manoov Rajapandy and Anand Anbarasu, An improved unsupervised learning approach for potential human microRNA–disease association inference using cluster knowledge, Network Modeling Analysis in Health Informatics and Bioinformatics, 2021 10, Pages 21.
  • Gayathri Ashok, Sravan Kumar Miryala, Anand Anbarasu, Sudha Ramaiah, Integrated systems biology approach using gene network analysis to identify the important pathways and new potential drug targets for Neuroblastoma, Gene Reports, 2021, 23, Pages 101101.
  • Soumya Basu, Sudha Ramaiah, Anand Anbarasu, In-silico strategies to combat COVID-19: A comprehensive review, Biotechnology & Genetic Engineering Reviews, 2021, 37, Pages 64-81.
  • Chaitra Shankar, Soumya Basu, Binesh Lal, Sathiya Shanmugam, Karthick Vasudevan, Purva Mathur, Sudha Ramaiah, Anand Anbarasu, Balaji Veeraraghavan, Aerobactin, seems to be a promising marker compared to unstable RmpA2 for the identification of hypervirulent carbapenem resistant Klebsiella pneumoniae: in-silico and in-vitro evidence, Frontiers in Cellular and Infection Microbiology, 2021, 11,  Pages 709681.
  • Sravan Kumar Miryala, Soumya Basu, Aniket Naha, Reetika Debroy, Sudha Ramaiah, Anand Anbarasu, Saravanan Natarajan, Identification of bioactive natural compounds as efficient inhibitors against Mycobacterium tuberculosis protein-targets: A molecular docking and molecular dynamics simulation study, Journal of Molecular Liquids, 2021, 341, Pages 117340.
  • Aniket Naha, Saranya Vijayakumar, Binesh Lal, Baby Abirami Shankar, Suriya Chandran, Sudha Ramaiah, Balaji Veeraraghavan, Anand Anbarasu, Genome sequencing and molecular characterisation of XDR Acinetobacter baumannii reveal complexities in resistance: Novel combination of Sulbactam-Durlobactam holds promise for therapeutic intervention, Journal of cellular Biochemistry, 2021, 122, Pages 1946-1957.[TOP]

2020

  • Basu, Soumya, Balaji Veeraraghavan, Sudha Ramaiah, and Anand Anbarasu. “Novel cyclohexanone compound as a potential ligand against SARS-CoV-2 main-protease.” Microbial pathogenesis 149 (2020): 104546.
  • Mahalakshmi Thillainayagam, Anand Anbarasu, Sudha Ramaiah, Molecular docking and dynamics studies on novel benzene sulphonamide substituted pyrazole-pyrazoline analogues as potent inhibitors of Plasmodium falciparum Histo aspartic protease, Journal of Biomolecular structure and Dynamics, 2020, 38, Pages 3235–3245.
  • Sravan Kumar Miryala, Anand Anbarasu, Sudha Ramaiah, Role of SHV-11 a class A β-lactamase gene in multidrug resistance among Klebsiella pneumoniae strains and understanding its mechanism by gene network analysis, Microbial Drug Resistance, 2020, 26, Pages 900-908.
  • Reetika Debroy, Sravan Kumar Miryala, Aniket Naha, Anand Anbarasu, Sudha Ramaiah, Gene interaction network studies to decipher the multi-drug resistance mechanism in Salmonella enterica serovar Typhi CT18 reveal potential drug targets, Microbial Pathogenesis, 2020, 142, Pages 104096.
  • Aniket Naha, Sravan Kumar Miryala, Reetika Debroy, Sudha Ramaiah, Anand Anbarasu, Elucidating the multi-drug resistance mechanism of Enterococcus faecalis V583: A gene interaction network analysis, Gene, 2020, 748, Pages 144704.
  • Anand Anbarasu, Sudha Ramaiah, Paul Livingstone, Vaccine repurposing approach for preventing COVID 19: Can MMR vaccines reduce morbidity and mortality? Human Vaccines and Immunotherapeutics, 2020, 16, Pages 2217-2218.
  • Kayeen Vadakkan, Janarthanam Hemapriya, Anand Anbarasu, Sudha Ramaiah, Selvaraj Vijayanand,Quorum quenching by 2-Hydroxyanisole extracted from Solanum torvum on Pseudomonas aeruginosa and its inhibitory action upon LasR protein, Gene Reports, 2020, 21, Pages 100802.[TOP]

2019

  • Mahalakshmi Thillainayagam, Kullappan Malathi, Anand Anbarasu, Harpeet Singh, Renu Bahadur and Sudha Ramaiah, Insights on inhibition of Plasmodium falciparum plasmepsin I by novel epoxyazadiradione derivatives – Molecular docking and Comparative molecular field analysis, Journal of Biomolecular structure and Dynamics, 2019, 37(12),  Pages 3168-3182.
  • Adhithya Ragunathan, Kullappan Malathi, Sudha Ramaiah, Anand Anbarasu, FtsA as a cidal target for Staphylococcus aureus: Molecular docking and dynamics studies, Journal of Cellular Biochemistry, 2019, 120, Pages 7751-7758.
  • Akshay Bhatt, Anand Anbarasu, Rapid and economic synthesis of bone like apatite using simulated body fluid (SBF), Materials Research Innovations, 2019, 23, Pages 149-154.
  • Somorita Baishya, Sheuli Kangsa Banik, Anupam Das Talukdar, Anand Anbarasu, Amitabha Bhattacharjee, Manabendra Dutta Choudhury, Identification of potential drug targets against carbapenem resistant Enterobacteriaceae (CRE) strains using in silico gene network analysis, Gene Reports, 2019, 14, Pages 129–137.
  • Kullappan Malathi, Anand Anbarasu, Sudha Ramaiah, Comparative Molecular Field Analysis and Molecular Docking Studies on Quinolinone Derivatives Indicate Potential Hepatitis C Virus Inhibitors, Cell Biochemistry and Biophysics, 2019, 77, Pages 139-156.
  • Sravan Kumar Miryala, Anand Anbarasu, Sudha Ramaiah, Impact of Bedaquiline and Capreomycin on the gene expression patterns of multidrug resistant Mycobacterium tuberculosis H37Rv Strain and understanding the molecular mechanism of antibiotic resistance, Journal of Cellular Biochemistry, 2019, 120, Pages 14499-14509.
  • Kullappan Malathi, Anand Anbarasu, Sudha Ramaiah, Identification of potential inhibitors for Klebsiella pneumoniae carbapenemase-3: a molecular docking and dynamics study, Journal of Biomolecular structure and Dynamics, 2019, 37, Pages 4601-4613.
  • Sravan Kumar Miryala, Anand Anbarasu, Sudha Ramaiah, Systems biology studies in Pseudomonas aeruginosa PA01 to understand their role in biofilm formation and multidrug efflux pumps, Microbial Pathogenesis, 2019, 136,103668.
  • Sravan Kumar Miryala, Ramaiah S. Exploring the multi-drug resistance in Escherichia coli O157:H7 by gene interaction network: A systems biology approach. Genomics, 2019, 11, Pages 958-965.
  • Malathi K, Ramaiah S. Mechanism of imipenem resistance in metallo-β-lactamases expressing pathogenic bacterial spp. and identification of potential inhibitors: An in silico approach. Journal of Cellular Biochemistry, 2019, 120, Pages 584-591.[TOP]

2018

  • Adhithya Ragunathan, Kullappan Malathi, Anand Anbarasu, MurB as a target in an alternative approach to tackle the Vibrio cholerae resistance using molecular docking and simulation study, Journal of Cellular Biochemistry, 2018, 119, Pages 1726-1732.
  • Sravan Kumar Miryala, Anand Anbarasu, Sudha Ramaiah, Discerning Molecular Interactions: A comprehensive review on Biomolecular Interaction Databases and Network Analysis Tools, GENE, 2018, 642, Pages 84-94.
  • Malathi K, Ramaiah S. Bioinformatics approaches for new drug discovery: a review. Biotechnology & Genetic Engineering Reviews, 2018, 34: Pages 243-260.[TOP]

2017

  • Subramanian Suganya, Balaji Nandagopal, Anand Anbarasu, Natural inhibitors of HMG CoA reductase – an insilico approach through molecular docking and simulation studies, Journal of Cellular Biochemistry, 2017, 118: Pages 52-57
  • Kullappan Malathi, Anand Anbarasu, Sudha Ramaiah, Exploring the resistance mechanism of imipenem in carbapenem hydrolysing class D beta-lactamases OXA-143 and its variant OXA-231 (D224A) expressing Acinetobacter baumannii: An in-silico approach, Computational Biology and Chemistry, 2017, 67: Pages 1-8.
  • Rayapadi G Swetha, Sudha Ramaiah, Kanagaraj Sekar, Anand Anbarasu, Melioidosis Database (MDB): A comprehensive web based resource on Melioidosis and gene protein repository for Burkholderia pseudomallei, Research Journal of Biotechnology, 2017, 12(1): Pages 48-55.
  • Rayapadi G Swetha, Sudha Ramaiah, Anand Anbarasu, R521C and R521H mutations in FUS result in weak binding with Karyopherinβ2 leading to Amyotrophic lateral sclerosis: A molecular docking and dynamics study, Journal of Biomolecular structure and Dynamics, 2017, 35(10): Pages 2169–2185.
  • Akshay Bhatt, Anand Anbarasu, Nanoscale Biomaterials for 3D printing, IOSR Journal of Pharmacy and Biological Sciences, 2017, 12(3): Pages 80-86.
  • Subramanian Suganya, Subapriya Natarajan, Duraipandian Chamundeeswari, Anand Anbarasu, Kunissery A. Balasubramanian, Lynn C. Schneider, Balaji Nandagopal, Clinical Evaluation of a Polyherbal Nutritional Supplement in Dyslipidemic Patients, Journal of Dietary Supplements, 2017, 14 (6), Pages 679-690.[TOP]

2016 to 2003

  • Lei Wei, Sreenivasulu Chintala, Eric Ciamporcero, Swathi Ramakrishnan, May Elbanna, Jianmin Wang, Qiang Hu, Sean T. Glenn, Mitsuko Murakami, Lu Liu, Eduardo Cortes Gomez, Yuchen Sun, Jacob Conroy, Kiersten Marie Miles, Kullappan Malathi, Sudha Ramaiah, Anand Anbarasu, Anna Woloszynska- Read, Candace S. Johnson, Jeffrey Conroy, Song Liu, Carl D. Morrison and Roberto Pili,  Genomic profiling is predictive of response to cisplatin treatment but not to PI3K inhibition in bladder cancer patient-derived xenografts, Oncotarget, 2016, 7(47) Pages 76374-76389.
  • Kullappan Malathi, Anand Anbarasu and Sudha Ramaiah, Ethyl Iso-allocholate from a Medicinal Rice Karungkavuni Inhibits Dihydropteroate Synthase in Escherichia coli: A Molecular Docking and Dynamics Study, Indian Journal of Pharmaceutical sciences, 2016, Pages 780-788.
  • P. Lavanya, Sudha Ramaiah and Anand Anbarasu, Ethyl 4-(4-methylphenyl)-4-pentenoate from Vetiveria zizanioides inhibits Dengue NS2B-NS3 protease and prevents viral assembly: A Computational molecular dynamics and docking study, Cell Biochemistry and Biophysics, 2016, 74: Pages 337-351.
  • Rayapadi Swetha and Anand Anbarasu, A review on Infectious Diseases and their Importance in Developing Biological Databases, Research Journal of Pharmacy and Technology, 2016, 9(5): Pages 621-624.
  • Mahalakshmi Thillainayagam, Anand Anbarasu and Sudha Ramaiah, Comparative Molecular Field Analysis and molecular docking studies on novel aryl chalcone derivatives against an important drug target cysteine proteasein Plasmodium falciparum, Journal of Theoretical Biology, 2016, 403: Pages 110-128.
  • Parvinder Kaur, Santanu Datta, Radha Krishan Shandil, Naveen Kumar, Nanduri Robert, Upneet K. Sokhi, Supreeth Guptha, Shridhar Narayanan, Anand Anbarasu and Sudha Ramaiah, Unravelling the Secrets of Mycobacterial Cidality through the Lens of Antisense, PLOS ONE, 2016, 11(5): e0154513.
  • Rayapadi G Swetha, Sudha Ramaiah, Anand Anbarasu and Kanagaraj Sekar, Ebolavirus Database: Gene and Protein Information Resource for Ebolaviruses, Advances in Bioinformatics, 2016 Article ID 1673284, 4 pages.
  • Rayapadi G Swetha, Madangopal Sandhya, Sudha Ramaiah and Anand Anbarasu, Identification of CD4+ T-cell epitope and investigation of HLA distribution for the immunogenic proteins of Burkholderia pseudomallei using in silico approaches – A key vaccine development strategy for melioidosis, Journal of Theoretical Biology, 2016, 400: Pages 11-18.
  • Rayapadi Swetha, Sudha Ramaiah and Anand Anbarasu, Molecular dynamics studies on D835N mutation in FLT3 – its impact on FLT3 protein structure, Journal of Cellular Biochemistry 2016, 117: Pages 1439–1445.
  • P. Anitha, Anand Anbarasu and Sudha Ramaiah, Gene network analysis of metallo beta lactamase family proteins indicates the role of gene partners in antibiotic resistance and reveals important drug targets, Journal of Cellular Biochemistry 2016, 117: Pages 1330–1339.
  • P. Lavanya, Sudha Ramaiah and Anand Anbarasu, A molecular docking and dynamics study to screen potent anti-staphylococcal compounds against ceftaroline resistant MRSA, Journal of Cellular Biochemistry 2016, 117(2): Pages 542-548.
  • Sudha Ravishankar, Anisha Ambady, Swetha G Rayapadi, Anand Anbarasu, Sudha Ramaiah and Vasan K Sambandamurthy, Essentiality assessment of Cysteinyl and Lysyl-tRNA synthetases of Mycobacterium smegmatis PLOS ONE, 2016, 11(1): e0147188.
  • P.Anitha, Anand Anbarasu and Sudha Ramaiah, Gene network analysis reveals the association of important functional partners involved in antibiotic resistance: A report on an important pathogenic bacterium Staphylococcus aureus, GENE 2016, (575) Pages 253-263.
  • C. Ranjith Kumar, Sudha Ramaiah and Anand Anbarasu, Green Synthesis of Silver Nano Particles Biosynthesized from Marine Alga Colpomenia Peregrina and their Characterization, Journal of Pure and Applied Microbiology, 2015, 9(4), Pages 3363-3366.
  • P. Lavanya, Sudha Ramaiah and Anand Anbarasu, Computational analysis reveal inhibitory action of nimbin against dengue viral envelope protein, Virus Disease, 2015, 26(4) Pages 243-254.
  • K Rajesh, P Lavanya, P Iniyavan, S Sarveswari, Sudha Ramaiah, Anand Anbarasu and V Vijayakumar, Regioselective Synthesis of 2-Chloroquinoline Based Ethyl 4-(3-Hydroxyphenyl)-2,7,7-Trimethyl-5-Oxo-1,4,5,6,7,8-Hexahydroquinoline-3-Carboxylates and their In-Silico Evaluation Against P. falciparum Lactate Dehydrogenase, Medicinal Chemistry 2015, 11(8) Pages 789-797.
  • P. Lavanya, Sudha Ramaiah, Harpeet Singh, Renu Bahadur and Anand Anbarasu, Investigations on the role of CH…O interactions and its impact on stability and specificity of Penicillin binding proteins, Computers in Biology & Medicine, 2015, (65) Pages 85-92.
  • Sudha Ravishankar, Anisha Ambady, Haripriya Ramu, Naina Vinay Mudugal, Ragadeepthi Tunduguru, Anand Anbarasu, Umender K Sharma, Vasan K Sambandamurthy and Sudha Ramaiah, An IPTG inducible conditional expression system mycobacteria, PLOS ONE, 2015, 10(8): e0134562.
  • P. Lavanya, Susmita Bag, Sudha Ramaiah and Anand Anbarasu, Importance of cation-π interactions in the conformational stability and specificity of β-lactamases.  Journal of Indian Chemical Society, 2015, (92) Pages 1008-1010.
  • P. Anitha, R. G. Swetha, Anand Anbarasu and Sudha Ramaiah, Cation-pi interaction in metalloproteins: A bioinformatics approach. Journal of Indian Chemical Society, 2015, (92) Pages 518-520.
  • Chundi Vinay Kumar, Rayapadi Swetha, Sudha Ramaiah and Anand Anbarasu, Tryptophan to Glycine mutation in the position 116 leads to protein aggregation and decreases in stability of the protein LITAF, Journal of Biomolecular structure and Dynamics, 2015, 33(8) Pages 1695-1709.
  • P.Anitha, Susmitha Bag, Anand Anbarasu and Sudha Ramaiah, Gene and Protein Network analysis of AmpC β lactamase, Cell Biochemistry and Biophysics, 2015, (71) Pages 1553-1567.
  • Susmitha Bag and Anand Anbarasu, Revealing the strong functional association of adipor2 and cdh13 with adipoq: A gene network study, Cell Biochemistry and Biophysics, 2015, (71) Pages 1445-1456.
  • Parvinder Kaur, Anirban Ghosh, Ramya V.K., Deepa G.B., Vijayshree Achar, Santanu Datta, Shridhar Narayanan, Anand Anbarasu and Sudha Ramaiah,  A high-throughput cidality screen for Mycobacterium tuberculosis, PLOS ONE, 2015, 10(2): e0117577.
  • Susmitha Bag, Sudha Ramaiah and Anand Anbarasu, fabp4 is central to eight obesity associated genes: A Functional gene network-based polymorphic study, Journal of Theoretical Biology, 2015, (364) Pages 344-354.
  • Mahalakshmi Thillainayagam,Lavanya Pandian, Kumar Kalavathy Murugan, Vijayakumar Vijayaparthasarathi, Sarveswari Sundar, Anand Anbarasu and Sudha Ramaiah, In-silico analysis reveals the anti-malarial potential of quinolinyl chalcone derivatives, Journal of Biomolecular structure and Dynamics, 2015, (33) Pages 961-977.
  • K.Krishnanunni,  P. Senthilvel, Sudha Ramaiah and Anand Anbarasu, Study of chemical composition and volatile compounds along with In-vitro assay of antioxidant activity of two medicinal rice varieties: Karungkuravai and Mappilai samba, Journal of Food Science & Technology, 2015, 52(5) Pages 2572-2584.
  • Susmitha Bag, Sudha Ramaiah and Anand Anbarasu, Network and Polymorphic Analysis of Obesity Candidate Gene-Plin1: A Bioinformatics Approach, International Journal of Human Genetics, 2014, 14(3,4) Pages 119-129.
  • Rayapadi Swetha, Dinesh Kumar Kala Sekar, Ekambaram Durga Devi, Zaheer Zameer Ahmed, Sudha Ramaiah, Anand Anbarasu and Kanagaraj Sekar, Streptococcus pneumoniae Genome Database (SPGDB): A database for strain specific comparative analysis of Streptococcus pneumoniae genes and proteins, Genomics, 2014, (104) Pages 582-586.
  • Deepak Kumar Jha, Likun Panda, Sudha Ramaiah and Anand Anbarasu, Evaluation and comparison of radical scavenging properties of solvent extracts of Justicia leaf using DPPH assay, Applied Biochemistry & Biotechnology 2014, (174), Pages 2413-2425.
  • P. Lavanya, Sudha Ramaiah and Anand Anbarasu, Binding site residues in β-lactamases: Role in non-classical interactions and metal binding, Journal of Coordination Chemistry 2014, 67(17), Pages 2898-2910.
  • Chundi Vinay Kumar, Rayapadi Swetha, Anand Anbarasu and Sudha Ramaiah, Computational analysis reveals the association of Threonine 118 Methionine mutation in PMP22 resulting in CMT-1A, Advances in Bioinformatics, 2014, Article ID:502618, 10 Pages.
  • Rayapadi G Swetha, Dinesh Kumar Kala Sekar, Sudha Ramaiah, Anand Anbarasu and Kanagaraj Sekar, Haemophilus influenzae Genome Database (HIGDB): A single point web resource for Haemophilus influenzae, Computers in Biology & Medicine, 2014, (55) Pages 86-91.
  • K.M. Kumar,  P. Lavanya, Anand Anbarasu and Sudha Ramaiah, Molecular dynamics and molecular docking studies on E166A point mutant,  R274N/R276N double mutant and E166A/R274N/R276N triple mutant forms of class A β-lactamases, Journal of  Biomolecular structure and Dynamics, 2014, 32(12) Pages 1953-1968.
  • P.Anitha, P. Lavanya, Anand Anbarasu and Sudha Ramaiah, Molecular Docking study of Catechins compounds from Camellia sinensis against UPPS in Staphylococcus aureus, International Journal for Computational Biology, 2014, 3(2) Pages 03-09.
  • K.M.Kumar, P.Anitha, V.Sivasakthi, Susmitha Bag, P.Lavanya, Anand Anbarasu and Sudha Ramaiah, In-silico study on Penicillin derivatives and Cephalosporins for Upper Respiratory Tract bacterial pathogens, 3Biotech, 2014, (4) Pages 241-251.
  • Chundi Vinay Kumar, K.M.Kumar, Rayapadi Swetha, Sudha Ramaiah and Anand Anbarasu, Protein aggregation due to nsSNP resulting in P56S VABP protein is associated with amyotrophic lateral sclerosis, Journal of Theoretical Biology, 2014, (354) Pages 72-80.
  • Madhan Sugumar, K.M.Kumar, Anand Manoharan, Anand Anbarasu and Sudha Ramaiah, Detection of OXA-1 β-Lactamase Gene of Klebsiella pneumoniae from Blood Stream Infections (BSI) by Conventional PCR and In-Silico Analysis to Understand the Mechanism of OXA Mediated Resistance, PLOS ONE, 2014, 9(3), Pages e91800.
  • P.Anitha, Anand Anbarasu and Sudha Ramaiah, Computational gene network study on antibiotic resistance genes of Acinetobacter baumannii, Computers in Biology & Medicine, 2014, (48) Pages 17-27.
  • K.M.Kumar, Anand Anbarasu and Sudha Ramaiah, Molecular docking and Molecular dynamics studies on β-lactamases and Penicillin binding proteins, Molecular Biosystems, 2014, 10 (4) Pages 891 – 900.
  • Krishnanunni, Sudha Anand and Anand Anbarasu, Total Phenolic Content And “In-Vitro” Antioxidant Assay of Two Medicinal Rice Varieties – Karungkavuni And Kuzhiadichan, International Journal of Pharma and Bio Sciences, 2014, 5(2) Pages 540-548.
  • P. Lavanya, Sudha Ramaiah and Anand Anbarasu, Computational analysis of N-H…π interactions and its impact on the structural stability of β-lactamases, Computers in Biology & Medicine, 2014, (46) Pages 22-28.
  • V. Sivasakthi, Anand Anbarasu and Sudha Ramaiah, π-π interactions in structural stability: Role in RNA Binding Proteins, Cell Biochemistry and Biophysics, 2013 (67) Pages 853–863.
  • Neha Singh, Akriti Jain and Anand Anbarasu, In silico analysis of Interleukin-2: A Comparative study between Homo sapiens and Mus musculus, International Journal of Pharma and Bio Sciences, 2013 4(4) Pages 902-909.
  • P. Lavanya, Sudha Ramaiah and Anand Anbarasu, Non-canonical H-bonds in β-lactamases: Importance of C-H· · · π interactions, Journal of Biological Inorganic Chemistry, 2013 (18) Pages 539-545.
  • P. Senthilvel, P. Lavanya, K. M. Kumar, R. Swetha, P. Anitha, S. Bag, S. Sarveswari, V.Vijayakumar, Sudha Ramaiah and Anand Anbarasu, Flavonoid from Carica papaya inhibits NS2B-NS3 protease and prevents Dengue 2 viral assembly, Bioinformation, 2013 9(18) Pages 889-895.
  • Susmita Bag, Arpita Kundu, Sudha Ramaiah and Anand Anbarasu, Obesity Study Among Patients In Eastern India Suggests WC And WHR As Better Indicators, International Journal of Pharmacy and Pharmaceutical sciences, 2013, 5(4) Pages 659-665.
  • P. Lavanya, Sudha Ramaiah and Anand Anbarasu, Influence of C-H…O interactions in the structural stability of β-lactamases, Journal of Biological Physics, 2013, (39) Pages 649-663.
  • Swetha Rayapadi and Anand Anbarasu, A Review on Melioidosis, International Journal of Pharma and Bio Sciences, 2013 4(3) Pages 1178-1185.
  • V. Sivasakthi, P. Anitha, K.M. Kumar, Susmita Bag, P. Senthilvel, P. Lavanya, R. Swetha, Anand Anbarasu and Sudha Ramaiah, Aromatic-aromatic interactions: Analysis of π-π interactions in interleukins and TNF proteins, Bioinformation, 2013 9(8) Pages 432-439.
  • Arpita Kundu, Susmita Bag, Sudha Ramaiah and Anand Anbarasu, Leucine to Proline substitution by SNP at position 197 in Caspase9 gene expression leads to neuroblastoma: A Bioinformatics analysis, 3Biotech, 2013 3 Pages 225–234.
  • P. Lavanya, Sudha Ramaiah and Anand Anbarasu, Cation-π interactions in β-lactamases: The role in structural stability, Cell Biochemistry and Biophysics, 2013 66(1) Pages 147-155.
  • Anand Anbarasu, Role of cation-π interactions in the structural stability of Bacterial adhesions, Protein & Peptide letters 2013 (20) Pages 695-704.
  • Arpita Kundu, Parvathy Ramakrishnan, Ambika Rajendran, Nivedita V. Dharwar and Anand Anabarasu, Analysis of non-synonymous single-nucleotide polymorphisms and population variability of PLD2 gene associated with hypertension, International journal of Bioinformatics research & applications, 2013 9(3) Pages 227-241.
  • Arpita Kundu and Anbarasu Anand, Computational study of ADD1 gene polymorphism associated with Hypertension, Cell Biochemistry and Biophysics, 2013 (65) Pages 13-19.
  • P. Anitha, V. Sivasakthi, P. Lavanya, Susmita Bag, K.M. Kumar, Anand Anbarasu and Sudha Ramaiah, Arginine and Lysine interactions with π residues in metalloproteins, Bioinformation 2012 8(17) Pages-820-826. 
  • Deepak Kumar Jha, Likun Panda, P. Lavanya, Sudha Ramaiah and Anand Anbarasu, Detection and confirmation of alkaloids in leaves of Justicia adhatoda and bioinformatics approach to elicit its anti-tuberculosis activity, Applied Biochemistry and Biotechnology, 2012 168, Pages-980-990.
  • Arpita Kundu, Sudha Ramaiah and Anand Anbarasu, Mutation in Angiotensin II type 1 receptor disrupts its binding to Angiotensin II leading to hypotension: An insight into Hydrogen bonding patterns, Frontiers in Biology, 2012 7(5) Pages –477-484. 
  • Anand Anbarasu and Arpita Kundu, In-Silico study of Alzheimer’s disease in relation to Fyn gene, Interdisciplinary Sciences: Computational life sciences, 2012 4(2) Pages 153-160.
  • Susmita Bag and Anand Anbarasu. Obesity: A critical Review. International Journal of Pharma and Bio Sciences, Vol 2(4) Oct-Dec2011, Pages 582-592.
  • Deepak Kumar Jha, Likun Panda and Anand Anbarasu, Comparative analysis and identification of novel β-lactamase inhibitors, International Journal of Pharma and Bio Sciences, Vol 2(4) Oct-Dec2011, 88-98.
  • Deepak Kumar Jha, Sarika Rana, Likun Panda, Devyani Samantarrai and Anand Anbarasu, Molecular docking approach to locate the potent anti-leishmanial agent, Journal of Pharmacy research, Volume 4(7) September 2011, 2003-2006.
  • Arpita Kundu and Anand Anbarasu, Analysis of single nuceleotide polymorphisms of collagen type I alpha 1 gene associated with osteoporosis: An in-silico study, Journal of OMICS Research, Volume 1, 2011, Pages 32-40.
  • Anand Anbarasu and Arpita Kundu, Analysis of non-synonymous single-nucleotide polymorphisms of casp9 gene associated with osteoporosis, Journal of carcinogenesis, 2011 PP5, S2.
  • K. Sophiya and Anand Anbarasu, Structural stability studies in adhesion molecules-role of cation-π interactions, Protoplasma, 248, 2011, Pages 673-682.
  • Anand Anbarasu and Arpita Kundu, Influence of SMAD1 gene in osteoporosis: A bioinformatics approach, Open Access Bioinformatics, 2, 2010, Pages 79-87.
  • Sudha Anand, Anand Anbarasu and Rao Sethumadhavan, Evaluation of non-covalent interaction energies for neuronal and endothelial NOS proteins, International Journal of Soft computing & Bioinformatics, 1(1), 2010, Pages 29-36.
  • Anand Anbarasu, V.R. Prasad, S. Sathpathy and Rao Sethumadhavan, Influence of cation-pi interactions to the structural stability of prokaryotic and eukaryotic translation elongation factors, Protoplasma, 238(1-4), 2009, Pages 11-20.
  • Anand Anbarasu and P.S. Shrivaishnavi, Role of cation-π interactions in the structural stability of Bacterial exotoxins, Journal of Microbial & Biochemical Technology, (1), 2009, Pages 22-29.
  • Sudha Anand, Anand Anbarasu and Rao Sethumadhavan, Exploring the C-H…O interactions in glycoproteins, Applied Biochemistry and Biotechnology, 159(2), 2009, Pages 342-354.
  • Sudha Anand, Anand Anbarasu and Rao Sethumadhavan, Non-classical hydrogen bonds in interleukins: The role of C-H…O interactions, International Journal of Biological Macromolecules, 43, 2008, Pages 468-473.
  • Sudha Anand, Anand Anbarasu and Rao Sethumadhavan, Influence of C-H···π hydrogen bonds in interleukins, Insilico Biology, 8(3-4), 2008, Pages 261-273.
  • Anand Anbarasu, Sudha Anand and Sethumadhavan Rao, NH…π Interactions: Investigations on the Evidence and Consequences in RNA Binding Proteins, The open Structural Biology Journal, 2008, 2, Pages 33-42.
  • Anand Anbarasu, Sudha Anand and Sethumadhavan Rao, Investigations on un-conventional hydrogen bonds in RNA binding proteins: The   role of CH…O=C interactions, Biosystems, 90, 2007, Pages 792-801.
  • Anand Anbarasu, Sudha Anand, M. Madan Babu and Rao Sethumadhavan, Investigations on C-H…π interactions in RNA binding proteins, International Journal of Biological Macromolecules, 41, 2007, Pages 251-259.
  • Anand Anbarasu and Rao Sethumadhavan, Exploring the role of cation–π interactions in glycoproteins lipid-binding proteins and RNA-binding proteins, Journal of Theoretical Biology, 247, 2007, Pages 346-353.
  • Anand Anbarasu, Sudha Anand, Lazar Mathew and Rao Sethumadhavan, Influence of cation-π interactions on RNA-binding proteins, International Journal of Biological Macromolecules, 40, Issue 5, 2007, Pages 479-483.
  • Anand Anbarasu, Sudha Anand, Lazar Mathew and Sethumadhavan Rao, Computation of non-covalent interactions in TNF proteins and interleukins, Cytokine, 35,  2006, Pages 263-269.
  • Elizabeth Mathai, Mary V. Jesudason and Anand Anbarasu, Indirect immuno-fluorescent antibody test for the rapid diagnosis of melioidosis, Indian Journal of  Medical  Research, 118, 2003, Pages 68-70.
  • Mary V. Jesudason, Anand Anbarasu and T. Jacob John, Septicaemic melioidosis in a tertiary care hospital in south India, Indian Journal of Medical Research, 117, 2003, Pages 119-121.[TOP]